HL_6HTQ_110
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6HTQ|1|w|U|16, 6HTQ|1|w|C|17, 6HTQ|1|w|U|20
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HTQ_110 not in the Motif Atlas
- Homologous match to HL_4V9K_033
- Geometric discrepancy: 0.1994
- The information below is about HL_4V9K_033
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
6HTQ|1|w|C|13
6HTQ|1|w|A|14
6HTQ|1|w|G|15
6HTQ|1|w|U|16
6HTQ|1|w|C|17
6HTQ|1|w|G|18
6HTQ|1|w|G|19
6HTQ|1|w|U|20
6HTQ|1|w|A|21
6HTQ|1|w|G|22
Current chains
- Chain w
- E-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: