HL_6HTQ_119

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGGAAGGCUCGUCCGCU

Length

17 nucleotides

Bulged bases

6HTQ|1|A|C|1364, 6HTQ|1|A|U|1368, 6HTQ|1|A|C|1369, 6HTQ|1|A|G|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|A|A|1357
6HTQ|1|A|G|1358
6HTQ|1|A|G|1359
6HTQ|1|A|A|1360
6HTQ|1|A|A|1361
6HTQ|1|A|G|1362
6HTQ|1|A|G|1363
6HTQ|1|A|C|1364
6HTQ|1|A|U|1365
6HTQ|1|A|C|1366
6HTQ|1|A|G|1367
6HTQ|1|A|U|1368
6HTQ|1|A|C|1369
6HTQ|1|A|C|1370
6HTQ|1|A|G|1371
6HTQ|1|A|C|1372
6HTQ|1|A|U|1373

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22

Chain T

50S ribosomal protein L23