HL_6HTQ_125
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GCUAACUACGUGCCAGCAGC
- Length
- 20 nucleotides
- Bulged bases
- 6HTQ|1|a|C|527
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HTQ_125 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2705
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HTQ|1|a|G|515
6HTQ|1|a|C|516
6HTQ|1|a|U|517
6HTQ|1|a|A|518
6HTQ|1|a|A|519
6HTQ|1|a|C|520
6HTQ|1|a|U|521
6HTQ|1|a|A|522
6HTQ|1|a|C|523
6HTQ|1|a|G|524
6HTQ|1|a|U|525
6HTQ|1|a|G|526
6HTQ|1|a|C|527
6HTQ|1|a|C|528
6HTQ|1|a|A|529
6HTQ|1|a|G|530
6HTQ|1|a|C|531
6HTQ|1|a|A|532
6HTQ|1|a|G|533
6HTQ|1|a|C|534
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
- Chain u
- Transfer RNA; tRNA
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