HL_6I7O_016

3D structure

PDB id

6I7O (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

6I7O|1|2|U|719, 6I7O|1|2|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7O|1|2|G|703
6I7O|1|2|C|704
6I7O|1|2|U|705
6I7O|1|2|A|706
6I7O|1|2|A|707
6I7O|1|2|C|708
6I7O|1|2|C|709
6I7O|1|2|U|710
6I7O|1|2|U|711
6I7O|1|2|G|712
6I7O|1|2|A|713
6I7O|1|2|G|714
6I7O|1|2|U|715
6I7O|1|2|C|716
6I7O|1|2|C|717
6I7O|1|2|U|718
6I7O|1|2|U|719
6I7O|1|2|G|720
6I7O|1|2|U|721
6I7O|1|2|G|722
6I7O|1|2|G|723
6I7O|1|2|C|724
6I7O|1|2|U|725
6I7O|1|2|C|726
6I7O|1|2|U|727
6I7O|1|2|U|728
6I7O|1|2|G|729
6I7O|1|2|G|730
6I7O|1|2|C|731
6I7O|1|2|G|732
6I7O|1|2|A|733
6I7O|1|2|A|734
6I7O|1|2|C|735

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S

40S ribosomal protein S4-A