HL_6I7O_043
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CUUG
- Length
- 4 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6I7O_043 not in the Motif Atlas
- Geometric match to HL_7A0S_039
- Geometric discrepancy: 0.2365
- The information below is about HL_7A0S_039
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
6I7O|1|2b|C|276
6I7O|1|2b|U|277
6I7O|1|2b|U|278
6I7O|1|2b|G|279
Current chains
- Chain 2b
- 18S ribosomal RNA
Nearby chains
- Chain XE
- 60S ribosomal protein L24-A
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