HL_6I7V_008

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

6I7V|1|AA|C|330, 6I7V|1|AA|G|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.115

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6I7V|1|AA|A|320
6I7V|1|AA|A|321
6I7V|1|AA|C|322
6I7V|1|AA|U|323
6I7V|1|AA|G|324
6I7V|1|AA|A|325
6I7V|1|AA|G|326
6I7V|1|AA|A|327
6I7V|1|AA|C|328
6I7V|1|AA|A|329
6I7V|1|AA|C|330
6I7V|1|AA|G|331
6I7V|1|AA|G|332
6I7V|1|AA|U|333

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20