HL_6I7V_021

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAU(2MG)(5MC)AACGC

Length

10 nucleotides

Bulged bases

6I7V|1|AA|A|968, 6I7V|1|AA|G|971

QA status

Modified nucleotides: 2MG, 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_021 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.1054

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6I7V|1|AA|G|963
6I7V|1|AA|A|964
6I7V|1|AA|U|965
6I7V|1|AA|2MG|966
6I7V|1|AA|5MC|967
6I7V|1|AA|A|968
6I7V|1|AA|A|969
6I7V|1|AA|C|970
6I7V|1|AA|G|971
6I7V|1|AA|C|972

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AM

30S ribosomal protein S13