HL_6I7V_025

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

6I7V|1|AA|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_025 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3536

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6I7V|1|AA|G|1133
6I7V|1|AA|G|1134
6I7V|1|AA|U|1135
6I7V|1|AA|C|1136
6I7V|1|AA|C|1137
6I7V|1|AA|G|1138
6I7V|1|AA|G|1139
6I7V|1|AA|C|1140
6I7V|1|AA|C|1141

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AI

30S ribosomal protein S9