HL_6I7V_077

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

6I7V|1|CA|U|546, 6I7V|1|CA|G|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_077 not in the Motif Atlas

Homologous match to HL_5J7L_149

Geometric discrepancy: 0.2944

The information below is about HL_5J7L_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

6I7V|1|CA|G|543
6I7V|1|CA|C|544
6I7V|1|CA|U|545
6I7V|1|CA|U|546
6I7V|1|CA|A|547
6I7V|1|CA|G|548
6I7V|1|CA|G|549
6I7V|1|CA|C|550

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CK

50S ribosomal protein L13

Chain CS

50S ribosomal protein L21