HL_6I7V_107

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

6I7V|1|CA|A|1808

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_107 not in the Motif Atlas

Homologous match to HL_5J7L_179

Geometric discrepancy: 0.2074

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

6I7V|1|CA|C|1806
6I7V|1|CA|G|1807
6I7V|1|CA|A|1808
6I7V|1|CA|A|1809
6I7V|1|CA|A|1810
6I7V|1|CA|G|1811

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2

Chain CY

50S ribosomal protein L28