HL_6I7V_109

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

6I7V|1|CA|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_109 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1557

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6I7V|1|CA|G|1910
6I7V|1|CA|U|1911
6I7V|1|CA|A|1912
6I7V|1|CA|A|1913
6I7V|1|CA|C|1914
6I7V|1|CA|U|1915
6I7V|1|CA|A|1916
6I7V|1|CA|U|1917
6I7V|1|CA|A|1918
6I7V|1|CA|A|1919
6I7V|1|CA|C|1920

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA