HL_6I7V_110

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6I7V|1|CA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_110 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.1342

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6I7V|1|CA|G|1949
6I7V|1|CA|G|1950
6I7V|1|CA|U|1951
6I7V|1|CA|A|1952
6I7V|1|CA|A|1953
6I7V|1|CA|G|1954
6I7V|1|CA|U|1955
6I7V|1|CA|U|1956
6I7V|1|CA|C|1957

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA

Chain CL

50S ribosomal protein L14