HL_6I7V_191

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

6I7V|1|DA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_191 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.083

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6I7V|1|DA|U|2404
6I7V|1|DA|G|2405
6I7V|1|DA|A|2406
6I7V|1|DA|A|2407
6I7V|1|DA|U|2408
6I7V|1|DA|G|2409
6I7V|1|DA|G|2410
6I7V|1|DA|A|2411
6I7V|1|DA|A|2412
6I7V|1|DA|G|2413

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DM

50S ribosomal protein L15