HL_6I7V_216

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6I7V|1|BA|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_216 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.3204

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

6I7V|1|BA|C|1448
6I7V|1|BA|C|1449
6I7V|1|BA|U|1450
6I7V|1|BA|U|1451
6I7V|1|BA|C|1452
6I7V|1|BA|G|1453
6I7V|1|BA|G|1454
6I7V|1|BA|G|1455

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BT

30S ribosomal protein S20