HL_6I7V_231

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAGCGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_231 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.2666

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6I7V|1|CA|C|2855
6I7V|1|CA|A|2856
6I7V|1|CA|G|2857
6I7V|1|CA|C|2858
6I7V|1|CA|G|2859
6I7V|1|CA|A|2860
6I7V|1|CA|U|2861
6I7V|1|CA|G|2862

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CQ

50S ribosomal protein L19