HL_6I9R_011
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AACCCUAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6I9R|1|A|U|2071
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6I9R_011 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3312
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6I9R|1|A|A|2064
6I9R|1|A|A|2065
6I9R|1|A|C|2066
6I9R|1|A|C|2067
6I9R|1|A|C|2068
6I9R|1|A|U|2071
6I9R|1|A|A|2072
6I9R|1|A|A|2073
6I9R|1|A|A|2074
6I9R|1|A|U|2075
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: