HL_6ICZ_002
3D structure
- PDB id
- 6ICZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ICZ_002 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.36
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6ICZ|1|F|C|8
6ICZ|1|F|U|9
6ICZ|1|F|U|10
6ICZ|1|F|C|11
6ICZ|1|F|G|12
6ICZ|1|F|G|13
Current chains
- Chain F
- U6snRNA
Nearby chains
- Chain W
- Pre-mRNA-processing factor 17
Coloring options: