HL_6JQ6_001
3D structure
- PDB id
- 6JQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hatchet Ribozyme Structure soaking with Ir(NH3)6+
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.63 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33239.15
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 108
Unit IDs
6JQ6|1|U|G|6||||11_555
6JQ6|1|U|U|7||||11_555
6JQ6|1|U|G|8||||11_555
6JQ6|1|U|A|9||||11_555
6JQ6|1|U|G|10||||11_555
6JQ6|1|U|A|11||||11_555
6JQ6|1|U|A|12||||11_555
6JQ6|1|U|U|13||||11_555
6JQ6|1|U|C|14||||11_555
Current chains
- Chain U
- RNA (81-MER)
Nearby chains
No other chains within 10ÅColoring options: