6JQ6 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6JQ6_001 | 1/U/6:14 | T-loop with 2 stacked bulged bases Not in a motif group | ||
| HL_6JQ6_002 | 1/U/45:50 | No text annotation Not in a motif group | geometric HL_6JQ6_004 HL_29960.1 | |
| HL_6JQ6_003 | 1/U/6:14 | T-loop with 2 stacked bulged bases HL_41998.2 | ||
| HL_6JQ6_004 | 1/U/45:50 | No text annotation HL_29960.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6JQ6_001 | 1/U/31:32, 1/U/62:64 | Stack outside cWW Not in a motif group | ||
| IL_6JQ6_002 | 1/U/34:36, 1/U/58:60 | Multiple bulged bases Not in a motif group | ||
| IL_6JQ6_003 | 1/U/38:40, 1/U/55:56 | Single bulged U Not in a motif group | ||
| IL_6JQ6_004 | 1/U/31:32, 1/U/62:64 | Stack outside cWW IL_16396.3 | ||
| IL_6JQ6_005 | 1/U/34:36, 1/U/58:60 | Multiple bulged bases IL_88375.1 | ||
| IL_6JQ6_006 | 1/U/38:40, 1/U/55:56 | Single bulged U IL_83039.17 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6JQ6_001 | 1/U/27:31, 1/U/64:68, 1/U/69:77 | No text annotation Not in a motif group | ||
| J3_6JQ6_002 | 1/U/69:77, 1/U/27:31, 1/U/64:68 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
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