HL_6JQ6_003
3D structure
- PDB id
- 6JQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hatchet Ribozyme Structure soaking with Ir(NH3)6+
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.63 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6JQ6|1|U|G|6
6JQ6|1|U|U|7
6JQ6|1|U|G|8
6JQ6|1|U|A|9
6JQ6|1|U|G|10
6JQ6|1|U|A|11
6JQ6|1|U|A|12
6JQ6|1|U|U|13
6JQ6|1|U|C|14
Current chains
- Chain U
- RNA (81-MER)
Nearby chains
No other chains within 10ÅColoring options: