HL_6KE6_032
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 6KE6|1|SA|U|1595, 6KE6|1|SA|C|1596, 6KE6|1|SA|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6KE6_032 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3314
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6KE6|1|SA|G|1594
6KE6|1|SA|U|1595
6KE6|1|SA|C|1596
6KE6|1|SA|A|1597
6KE6|1|SA|U|1598
6KE6|1|SA|C|1599
6KE6|1|SA|A|1600
6KE6|1|SA|G|1601
6KE6|1|SA|C|1602
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain 5E
- U3 small nucleolar RNA-associated protein MPP10
- Chain 5G
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain RJ
- Ribosome biogenesis protein BMS1
- Chain RN
- Nucleolar complex protein 14
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