HL_6LKQ_012

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAAAGUUAAUACCUUUG

Length

17 nucleotides

Bulged bases

6LKQ|1|s|A|461, 6LKQ|1|s|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|s|U|458
6LKQ|1|s|A|459
6LKQ|1|s|A|460
6LKQ|1|s|A|461
6LKQ|1|s|G|462
6LKQ|1|s|U|463
6LKQ|1|s|U|464
6LKQ|1|s|A|465
6LKQ|1|s|A|466
6LKQ|1|s|U|467
6LKQ|1|s|A|468
6LKQ|1|s|C|469
6LKQ|1|s|C|470
6LKQ|1|s|U|471
6LKQ|1|s|U|472
6LKQ|1|s|U|473
6LKQ|1|s|G|474

Current chains

Chain s

16S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S16