HL_6LKQ_052
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LKQ_052 not in the Motif Atlas
- Homologous match to HL_5J7L_154
- Geometric discrepancy: 0.1592
- The information below is about HL_5J7L_154
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
6LKQ|1|t|G|712
6LKQ|1|t|G|713
6LKQ|1|t|U|714
6LKQ|1|t|A|715
6LKQ|1|t|A|716
6LKQ|1|t|C|717
6LKQ|1|t|A|718
6LKQ|1|t|C|719
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain N
- 30S ribosomal protein S15
- Chain s
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: