HL_6LKQ_105

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUCUGCAACUCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|s|G|1312
6LKQ|1|s|U|1313
6LKQ|1|s|C|1314
6LKQ|1|s|U|1315
6LKQ|1|s|G|1316
6LKQ|1|s|C|1317
6LKQ|1|s|A|1318
6LKQ|1|s|A|1319
6LKQ|1|s|C|1320
6LKQ|1|s|U|1321
6LKQ|1|s|C|1322
6LKQ|1|s|G|1323
6LKQ|1|s|A|1324
6LKQ|1|s|C|1325

Current chains

Chain s

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S13

Chain M

30S ribosomal protein S14

Chain R

30S ribosomal protein S19