HL_6LQP_014

3D structure

PDB id

6LQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACCCUUUGGAAG

Length

14 nucleotides

Bulged bases

6LQP|1|SA|U|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQP|1|SA|C|186
6LQP|1|SA|G|187
6LQP|1|SA|A|188
6LQP|1|SA|C|189
6LQP|1|SA|C|190
6LQP|1|SA|C|191
6LQP|1|SA|U|192
6LQP|1|SA|U|193
6LQP|1|SA|U|194
6LQP|1|SA|G|195
6LQP|1|SA|G|196
6LQP|1|SA|A|197
6LQP|1|SA|A|198
6LQP|1|SA|G|199

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain RP

U3 small nucleolar RNA-associated protein 20