HL_6LQP_016

3D structure

PDB id

6LQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUGUG

Length

7 nucleotides

Bulged bases

6LQP|1|SA|U|277, 6LQP|1|SA|U|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQP|1|SA|C|275
6LQP|1|SA|C|276
6LQP|1|SA|U|277
6LQP|1|SA|U|278
6LQP|1|SA|G|279
6LQP|1|SA|U|280
6LQP|1|SA|G|281

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain SH

40S ribosomal protein S6-A