HL_6LQR_009

3D structure

PDB id

6LQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State C)

Experimental method

ELECTRON MICROSCOPY

Resolution

8.6 Å

Loop

Sequence

CGACCCUUUGGAAG

Length

14 nucleotides

Bulged bases

6LQR|1|SA|U|194

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQR|1|SA|C|186
6LQR|1|SA|G|187
6LQR|1|SA|A|188
6LQR|1|SA|C|189
6LQR|1|SA|C|190
6LQR|1|SA|C|191
6LQR|1|SA|U|192
6LQR|1|SA|U|193
6LQR|1|SA|U|194
6LQR|1|SA|G|195
6LQR|1|SA|G|196
6LQR|1|SA|A|197
6LQR|1|SA|A|198
6LQR|1|SA|G|199

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain RP

U3 small nucleolar RNA-associated protein 20