HL_6LQT_001

3D structure

PDB id

6LQT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.9 Å

Loop

Sequence

CGUUGCAUUUUAUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQT|1|3A|C|201
6LQT|1|3A|G|202
6LQT|1|3A|U|203
6LQT|1|3A|U|204
6LQT|1|3A|G|205
6LQT|1|3A|C|206
6LQT|1|3A|A|207
6LQT|1|3A|U|242
6LQT|1|3A|U|243
6LQT|1|3A|U|244
6LQT|1|3A|U|245
6LQT|1|3A|A|246
6LQT|1|3A|U|247
6LQT|1|3A|G|248

Current chains

Chain 3A

U3 snoRNA

Nearby chains

Chain 3F

Ribosomal RNA-processing protein 9