HL_6LQV_009

3D structure

PDB id

6LQV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CGACCCUUUGGAAG

Length

14 nucleotides

Bulged bases

6LQV|1|SA|U|194

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQV|1|SA|C|186
6LQV|1|SA|G|187
6LQV|1|SA|A|188
6LQV|1|SA|C|189
6LQV|1|SA|C|190
6LQV|1|SA|C|191
6LQV|1|SA|U|192
6LQV|1|SA|U|193
6LQV|1|SA|U|194
6LQV|1|SA|G|195
6LQV|1|SA|G|196
6LQV|1|SA|A|197
6LQV|1|SA|A|198
6LQV|1|SA|G|199

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain RP

U3 small nucleolar RNA-associated protein 20