HL_6LQV_013
3D structure
- PDB id
- 6LQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GGAAUAAGGGUUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 6LQV|1|SA|G|371, 6LQV|1|SA|G|372, 6LQV|1|SA|U|374, 6LQV|1|SA|U|375
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LQV|1|SA|G|364
6LQV|1|SA|G|365
6LQV|1|SA|A|366
6LQV|1|SA|A|367
6LQV|1|SA|U|368
6LQV|1|SA|A|369
6LQV|1|SA|A|370
6LQV|1|SA|G|371
6LQV|1|SA|G|372
6LQV|1|SA|G|373
6LQV|1|SA|U|374
6LQV|1|SA|U|375
6LQV|1|SA|C|376
6LQV|1|SA|G|377
6LQV|1|SA|A|378
6LQV|1|SA|U|379
6LQV|1|SA|U|380
6LQV|1|SA|C|381
Current chains
- Chain SA
- 18S pre-rRNA
Nearby chains
- Chain 3F
- Ribosomal RNA-processing protein 9
- Chain RB
- U3 small nucleolar ribonucleoprotein protein LCP5
- Chain SF
- 40S ribosomal protein S4-A
- Chain SK
- 40S ribosomal protein S9-A
- Chain SM
- 40S ribosomal protein S11-A
Coloring options: