HL_6LSR_020

3D structure

PDB id

6LSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GGCGCGCUCGCC

Length

12 nucleotides

Bulged bases

6LSR|1|2|U|1410, 6LSR|1|2|C|1411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSR|1|2|G|1403
6LSR|1|2|G|1404
6LSR|1|2|C|1405
6LSR|1|2|G|1406
6LSR|1|2|C|1407
6LSR|1|2|G|1408
6LSR|1|2|C|1409
6LSR|1|2|U|1410
6LSR|1|2|C|1411
6LSR|1|2|G|1412
6LSR|1|2|C|1413
6LSR|1|2|C|1414

Current chains

Chain 2

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L29