HL_6LSR_031

3D structure

PDB id

6LSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

UAUAGACAGCGCCGAA

Length

16 nucleotides

Bulged bases

6LSR|1|2|A|1960

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSR|1|2|U|1957
6LSR|1|2|A|1958
6LSR|1|2|U|1959
6LSR|1|2|A|1960
6LSR|1|2|G|1961
6LSR|1|2|A|1962
6LSR|1|2|C|1963
6LSR|1|2|A|1964
6LSR|1|2|G|1965
6LSR|1|2|C|1966
6LSR|1|2|G|2021
6LSR|1|2|C|2022
6LSR|1|2|C|2023
6LSR|1|2|G|2024
6LSR|1|2|A|2025
6LSR|1|2|A|2026

Current chains

Chain 2

28S rRNA

Nearby chains

Chain b

60S ribosomal protein L18a