HL_6M62_023
3D structure
- PDB id
- 6M62 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUAAAGCGAAAACUUUAAAU
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6M62|1|1|G|993
6M62|1|1|G|994
6M62|1|1|U|995
6M62|1|1|A|996
6M62|1|1|A|997
6M62|1|1|A|998
6M62|1|1|G|999
6M62|1|1|C|1000
6M62|1|1|G|1001
6M62|1|1|A|1002
6M62|1|1|A|1003
6M62|1|1|A|1047
6M62|1|1|A|1048
6M62|1|1|C|1049
6M62|1|1|U|1050
6M62|1|1|U|1051
6M62|1|1|U|1052
6M62|1|1|A|1053
6M62|1|1|A|1054
6M62|1|1|A|1055
6M62|1|1|U|1056
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain 5
- rRNA-processing protein CGR1
- Chain F
- 60S ribosomal protein L7-A
- Chain S
- 60S ribosomal protein L20-A
- Chain T
- 60S ribosomal protein L21-A
- Chain s
- Nuclear GTP-binding protein NUG1
Coloring options: