RNA 3D Hub //

6M62 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6M62_0011/1/38:45No text annotation
homologous
HL_5TBW_001
NA
HL_6M62_0021/1/69:74No text annotation
homologous
HL_8C3A_002
NA
HL_6M62_0031/1/90:96No text annotation
homologous
HL_5TBW_003
NA
HL_6M62_0041/1/132:136No text annotation
homologous
HL_8C3A_004
NA
HL_6M62_0051/1/194:201T-loop with 2 stacked bulged bases
homologous
HL_5TBW_005
NA
HL_6M62_0061/1/208:212No text annotation
homologous
HL_5TBW_006
NA
HL_6M62_0071/1/216:224T-loop with unstacked turn
homologous
HL_8C3A_007
NA
HL_6M62_0081/1/278:287No text annotation
homologous
HL_8C3A_008
NA
HL_6M62_0091/1/303:312Pseudoknot geometry
homologous
HL_8C3A_009
NA
HL_6M62_0101/1/357:362GNRA
homologous
HL_5TBW_010
NA
HL_6M62_0111/1/382:387GNRA
homologous
HL_8C3A_011
NA
HL_6M62_0121/1/544:547No text annotation
HL_6M62_0131/1/599:604GNRA
homologous
HL_5TBW_013
NA
HL_6M62_0141/1/640:649No text annotation
HL_6M62_0151/1/686:694No text annotation
homologous
HL_8C3A_015
NA
HL_6M62_0161/1/707:712GNRA
homologous
HL_8C3A_016
NA
HL_6M62_0171/1/732:737GNRA
homologous
HL_5TBW_017
NA
HL_6M62_0181/1/763:768No text annotation
homologous
HL_8C3A_018
NA
HL_6M62_0771/1/845:849No text annotation
HL_6M62_0201/1/876:885No text annotation
homologous
HL_5TBW_020
NA
HL_6M62_0211/1/910:918No text annotation
homologous
HL_5TBW_021
NA
HL_6M62_0221/1/958:963Externally structured
homologous
HL_8C3A_022
NA
HL_6M62_0251/1/1126:1132Other HL
geometric
HL_4V9F_039
HL_77436.5
HL_6M62_0261/1/1148:1155No text annotation
homologous
HL_5TBW_026
NA
HL_6M62_0271/1/1239:1249No text annotation
homologous
HL_8C3A_027
NA
HL_6M62_0281/1/1267:1274GNRA wlth tandem sheared
homologous
HL_8C3A_028
NA
HL_6M62_0291/1/1347:1357No text annotation
homologous
HL_5TBW_029
NA
HL_6M62_0301/1/1403:1408GNRA
homologous
HL_8C3A_030
NA
HL_6M62_0311/1/1462:1470T-loop with 2 stacked bulged bases
homologous
HL_5TBW_031
NA
HL_6M62_0321/1/1506:1512Pseudoknot geometry with 3' bulge
homologous
HL_5TBW_032
NA
HL_6M62_0331/1/1544:1549GNRA variation
homologous
HL_8C3A_033
NA
HL_6M62_0341/1/1565:1574No text annotation
HL_6M62_0351/1/1599:1608No text annotation
homologous
HL_8C3A_035
NA
HL_6M62_0361/1/1634:1639GNRA
homologous
HL_8C3A_036
NA
HL_6M62_0371/1/1680:1688No text annotation
homologous
HL_8C3A_037
NA
HL_6M62_0381/1/1719:1725No text annotation
homologous
HL_5TBW_038
NA
HL_6M62_0391/1/1759:1766No text annotation
geometric
HL_5J7L_149
HL_09452.1
HL_6M62_0401/1/1792:1796Mini UNCG
homologous
HL_5TBW_040
NA
HL_6M62_0411/1/1844:1851No text annotation
homologous
HL_5TBW_041
NA
HL_6M62_0421/1/1862:1868GNRA
homologous
HL_5TBW_042
NA
HL_6M62_0431/1/1923:1928UNCG
homologous
HL_5TBW_043
NA
HL_6M62_0451/1/2110:2114No text annotation
geometric
HL_5J7L_143
HL_75660.5
HL_6M62_0461/1/2135:2145No text annotation
homologous
HL_5TBW_046
NA
HL_6M62_0471/1/2164:2170GNRA
homologous
HL_8C3A_047
NA
HL_6M62_0501/1/2534:2546No text annotation
HL_6M62_0511/1/2568:2573No text annotation
HL_6M62_0521/1/2632:2646No text annotation
HL_6M62_0531/1/2672:2682Mini UNCG
geometric
HL_4YAZ_004
HL_48778.2
HL_6M62_0541/1/2693:2700No text annotation
HL_6M62_0801/1/2723:2733No text annotation
HL_6M62_0781/1/2744:2749GNRA
homologous
HL_8P9A_170
HL_37824.7
HL_6M62_0571/1/2776:2784Pseudoknot geometry
homologous
HL_5TBW_060
NA
HL_6M62_0581/1/2840:2848UNCG variation
geometric
HL_1P6V_001
HL_53890.2
HL_6M62_0591/1/2897:2904No text annotation
homologous
HL_5TBW_062
NA
HL_6M62_0601/1/2920:2926No text annotation
geometric
HL_6U8D_003
HL_32346.4
HL_6M62_0611/1/2963:2968GNRA
homologous
HL_8C3A_065
NA
HL_6M62_0621/1/3025:3030GNRA related
geometric
HL_3OXE_002
HL_04783.2
HL_6M62_0631/1/3068:3073Ribsomal LSU H95
homologous
HL_8C3A_067
NA
HL_6M62_0641/1/3110:3124No text annotation
homologous
HL_8C3A_068
NA
HL_6M62_0651/1/3194:3197No text annotation
homologous
HL_5TBW_068
NA
HL_6M62_0661/1/3240:3247No text annotation
homologous
HL_5TBW_069
NA
HL_6M62_0671/1/3303:3311No text annotation
homologous
HL_8C3A_071
NA
HL_6M62_0681/1/3350:3353Mini UNCG
homologous
HL_5TBW_071
NA
HL_6M62_0791/2/47:56Pseudoknot with intercalation
homologous
HL_8C3A_229
NA
HL_6M62_0691/2/69:89No text annotation
homologous
HL_8C3A_230
NA
HL_6M62_0701/2/108:114No text annotation
homologous
HL_5TBW_075
NA
HL_6M62_0711/2/124:129No text annotation
homologous
HL_5TBW_076
NA
HL_6M62_0721/3/32:45No text annotation
homologous
HL_9DFE_067
HL_97756.2
HL_6M62_0731/3/87:94No text annotation
geometric
HL_8C3A_006
NA
HL_6M62_0741/6/11:17No text annotation
HL_6M62_0751/6/37:42Externally structured
geometric
HL_8C3A_022
NA

Problematic loops

#loop idProblemSequence
HL_6M62_076No text annotation
HL_6M62_019GNRA
HL_6M62_023No text annotation
HL_6M62_024No text annotation
HL_6M62_044No text annotation
HL_6M62_048No text annotation
HL_6M62_049No text annotation
HL_6M62_055No text annotation
HL_6M62_056GNRA with extra cWW

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6M62_0011/1/7:8,
1/2/150:152		Single bulged C
homologous
IL_5TBW_002
NA
IL_6M62_0021/1/13:15,
1/2/144:145		Single bulged U
homologous
IL_8C3A_003
NA
IL_6M62_0031/1/27:28,
1/1/56:58		No text annotation
homologous
IL_8C3A_004
NA
IL_6M62_0041/1/31:38,
1/1/45:53		tSH-tHW-tHH-tHS
homologous
IL_5TBW_005
NA
IL_6M62_0051/1/82:89,
1/1/97:103		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_006
NA
IL_6M62_0061/1/123:124,
1/1/144:149		No text annotation
geometric
IL_5TBW_007
NA
IL_6M62_0071/1/125:127,
1/1/141:143		Isolated non-canonical cWW pair
homologous
IL_8C3A_008
NA
IL_6M62_0081/1/163:165,
1/1/257:258		Single stack bend
homologous
IL_5TBW_009
NA
IL_6M62_0091/1/168:171,
1/1/247:254		No text annotation
IL_6M62_0101/1/177:178,
1/1/238:241		Minor groove platform
geometric
IL_4KQY_004
IL_02555.1
IL_6M62_0111/1/189:191,
1/1/204:205		Single bulged U
homologous
IL_8C3A_013
NA
IL_6M62_0121/1/272:274,
1/1/291:293		Isolated non-canonical cWW pair
geometric
IL_5MWI_002
IL_87907.2
IL_6M62_0131/1/337:339,
1/2/25:26		Single bulged A
homologous
IL_5TBW_013
NA
IL_6M62_0141/1/376:379,
1/1/390:403		No text annotation
homologous
IL_8C3A_015
NA
IL_6M62_0151/1/404:410,
1/2/13:19		Triple sheared with non-canonical cWW
geometric
IL_5TBW_015
NA
IL_6M62_0161/1/429:431,
1/1/628:630		Isolated non-canonical cWW pair
homologous
IL_5TBW_016
NA
IL_6M62_0181/1/512:513,
1/1/577:579		Single bulged A
homologous
IL_8C3A_020
NA
IL_6M62_0191/1/517:525,
1/1/567:573		No text annotation
homologous
IL_5TBW_019
NA
IL_6M62_0201/1/531:538,
1/1/553:561		No text annotation
homologous
IL_5TBW_020
NA
IL_6M62_0211/1/668:670,
1/1/792:794		Isolated non-canonical cWW pair
homologous
IL_8C3A_023
NA
IL_6M62_0221/1/680:684,
1/1/696:700		No text annotation
homologous
IL_5TBW_022
NA
IL_6M62_0231/1/725:728,
1/1/741:745		No text annotation
homologous
IL_8C3A_025
NA
IL_6M62_0241/1/752:753,
1/1/779:781		Single bulged A
homologous
IL_5TBW_024
NA
IL_6M62_0251/1/755:757,
1/1/774:777		No text annotation
geometric
IL_4N0T_004
IL_99358.1
IL_6M62_0261/1/758:763,
1/1/768:773		No text annotation
geometric
IL_5TBW_026
NA
IL_6M62_0271/1/803:805,
1/1/938:940		Isolated non-canonical cWW pair
homologous
IL_5TBW_027
NA
IL_6M62_0281/1/805:809,
1/1/931:938		No text annotation
homologous
IL_8P9A_256
IL_54041.2
IL_6M62_0291/1/833:834,
1/1/859:861		Single bulged G
geometric
IL_5TBW_029
NA
IL_6M62_0301/1/834:838,
1/1/855:859		Triple sheared
homologous
IL_8C3A_033
NA
IL_6M62_1221/1/843:845,
1/1/849:850		Single stack bend
geometric
IL_7A0S_054
IL_26793.1
IL_6M62_0311/1/869:872,
1/1/888:890		Major groove platform with extra cWW
homologous
IL_5TBW_031
NA
IL_6M62_0321/1/873:875,
1/1/886:887		Single bulged U
geometric
IL_3D2V_001
IL_89505.4
IL_6M62_0331/1/907:909,
1/1/919:923		Multiple bulged bases
geometric
IL_5TBW_033
NA
IL_6M62_0341/1/954:957,
1/1/964:967		Tandem non-canonical cWW pairs
geometric
IL_5C5W_003
NA
IL_6M62_1231/1/969:981,
1/1/1102:1113		No text annotation
IL_6M62_0351/1/983:985,
1/1/1099:1100		Single bulged G
homologous
IL_8C3A_040
NA
IL_6M62_1311/1/991:993,
1/1/1056:1058		No text annotation
IL_6M62_0371/1/1069:1074,
1/1/1084:1089		No text annotation
IL_6M62_0381/1/1120:1122,
1/1/1136:1138		Isolated non-canonical cWW pair
homologous
IL_8C3A_049
NA
IL_6M62_0391/1/1167:1171,
1/1/1328:1332		UAA/GAN
homologous
IL_8C3A_051
NA
IL_6M62_0401/1/1173:1180,
1/1/1325:1326		SSU/LSU pseudoknot
homologous
IL_5TBW_049
NA
IL_6M62_0411/1/1180:1182,
1/1/1324:1325		Single bulged U
geometric
IL_7A0S_035
IL_89505.4
IL_6M62_0421/1/1186:1194,
1/1/1314:1320		No text annotation
IL_6M62_0431/1/1194:1206,
1/1/1298:1314		No text annotation
IL_6M62_0441/1/1207:1209,
1/1/1296:1297		Single bulged U
homologous
IL_5TBW_053
NA
IL_6M62_1321/1/1218:1226,
1/1/1283:1287		Kink-turn
homologous
IL_8CRE_057
IL_99692.2
IL_6M62_0461/1/1234:1238,
1/1/1250:1254		No text annotation
homologous
IL_8C3A_058
NA
IL_6M62_0471/1/1262:1266,
1/1/1275:1277		Major groove platform with extra cWW
geometric
IL_5D8H_003
IL_51387.2
IL_6M62_0481/1/1376:1378,
1/1/1428:1431		No text annotation
homologous
IL_8C3A_061
NA
IL_6M62_0491/1/1385:1387,
1/1/1420:1421		Single bulged A
homologous
IL_8C3A_062
NA
IL_6M62_0501/1/1388:1395,
1/1/1415:1419		Kink-turn
homologous
IL_5TBW_059
NA
IL_6M62_0511/1/1398:1400,
1/1/1411:1412		Single bulged A
homologous
IL_5TBW_060
NA
IL_6M62_0521/1/1444:1450,
1/1/2354:2359		7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA
IL_6M62_1241/1/1501:1505,
1/1/1513:1515		C-loop
homologous
IL_8P9A_290
IL_63596.11
IL_6M62_0541/1/1532:1536,
1/1/1585:1590		UAA/GAN
homologous
IL_8C3A_067
NA
IL_6M62_1251/1/1618:1620,
1/1/1825:1826		Single stack bend
geometric
IL_5J7L_032
IL_26793.1
IL_6M62_1261/1/1623:1624,
1/1/1819:1822		No text annotation
homologous
IL_8C3A_483
NA
IL_6M62_0571/1/1627:1631,
1/1/1811:1816		No text annotation
homologous
IL_5TBW_066
NA
IL_6M62_0581/1/1645:1649,
1/1/1806:1810		Triple sheared
homologous
IL_5TBW_067
NA
IL_6M62_0591/1/1661:1663,
1/1/1786:1788		Isolated non-canonical cWW pair
homologous
IL_8C3A_074
NA
IL_6M62_0601/1/1669:1670,
1/1/1778:1780		Single bulged C
homologous
IL_8C3A_075
NA
IL_6M62_0611/1/1670:1671,
1/1/1776:1778		Single stack bend
geometric
IL_5TBW_070
NA
IL_6M62_0621/1/1694:1698,
1/1/1747:1752		No text annotation
homologous
IL_5TBW_071
NA
IL_6M62_0631/1/1702:1707,
1/1/1737:1743		No text annotation
homologous
IL_5TBW_072
NA
IL_6M62_0641/1/1711:1717,
1/1/1727:1733		Kink-turn
homologous
IL_5TBW_073
NA
IL_6M62_0651/1/1883:1889,
1/1/2346:2349		No text annotation
homologous
IL_8C3A_080
NA
IL_6M62_0661/1/1895:1897,
1/1/2338:2340		No text annotation
homologous
IL_8C3A_081
NA
IL_6M62_0671/1/1898:1901,
1/1/2336:2337		Major groove platform; stack outside cWW
homologous
IL_5TBW_076
NA
IL_6M62_1271/1/1898:1906,
1/1/2333:2337		No text annotation
homologous
IL_8C3A_484
NA
IL_6M62_0681/1/1901:1906,
1/1/2333:2336		Intercalated tWH
geometric
IL_5J7L_307
IL_76758.2
IL_6M62_0691/1/1918:1923,
1/1/1928:1934		tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_6M62_0701/1/1940:1942,
1/1/2106:2108		Isolated non-canonical cWW pair
homologous
IL_8C3A_085
NA
IL_6M62_0711/1/1947:1948,
1/1/2098:2101		No text annotation
homologous
IL_8C3A_086
NA
IL_6M62_0721/1/1948:1953,
1/1/2094:2098		No text annotation
IL_6M62_0731/1/2128:2129,
1/1/2323:2325		Single bulged A
homologous
IL_8C3A_087
NA
IL_6M62_0741/1/2156:2161,
1/1/2173:2180		Kink-turn related
homologous
IL_5TBW_083
NA
IL_6M62_0751/1/2391:2394,
1/1/2986:2988		No text annotation
homologous
IL_8C3A_096
NA
IL_6M62_0761/1/2396:2398,
1/1/2981:2984		Major groove platform
geometric
IL_5J7L_320
IL_48076.6
IL_6M62_0771/1/2406:2412,
1/1/2810:2815		No text annotation
IL_6M62_0781/1/2412:2414,
1/1/2806:2810		Isolated non-canonical cWW pair
geometric
IL_5J7L_009
IL_57744.1
IL_6M62_1281/1/2423:2429,
1/1/2600:2607		No text annotation
IL_6M62_0801/1/2520:2526,
1/1/2584:2587		No text annotation
homologous
IL_5TBW_096
NA
IL_6M62_0811/1/2528:2530,
1/1/2581:2582		No text annotation
IL_6M62_0821/1/2718:2721,
1/1/2735:2738		Tandem non-canonical cWW pairs
geometric
IL_5EW4_002
IL_85033.2
IL_6M62_0831/1/2741:2743,
1/1/2750:2753		No text annotation
geometric
IL_4N0T_004
IL_99358.1
IL_6M62_0841/1/2765:2766,
1/1/2792:2794		No text annotation
IL_6M62_0851/1/2767:2773,
1/1/2787:2791		No text annotation
IL_6M62_0861/1/2835:2839,
1/1/2849:2853		No text annotation
homologous
IL_8C3A_114
NA
IL_6M62_0871/1/2879:2881,
1/1/2943:2947		No text annotation
homologous
IL_8C3A_116
NA
IL_6M62_0881/1/2889:2891,
1/1/2912:2914		Isolated non-canonical cWW pair
homologous
IL_8C3A_118
NA
IL_6M62_0891/1/2891:2892,
1/1/2909:2912		Major groove platform with intercalation
geometric
IL_4V9F_089
IL_02555.1
IL_6M62_0901/1/2918:2920,
1/1/2926:2928		Isolated non-canonical cWW pair
homologous
IL_5TBW_112
NA
IL_6M62_0911/1/2959:2961,
1/1/2970:2973		No text annotation
IL_6M62_0921/1/3004:3007,
1/1/3139:3144		Double sheared
homologous
IL_8C3A_123
NA
IL_6M62_0931/1/3012:3014,
1/1/3040:3042		Isolated non-canonical cWW pair
homologous
IL_8C3A_124
NA
IL_6M62_0941/1/3018:3025,
1/1/3030:3036		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_116
NA
IL_6M62_0951/1/3047:3051,
1/1/3091:3094		Major groove minor groove platform with tHH
homologous
IL_5TBW_117
NA
IL_6M62_0961/1/3054:3059,
1/1/3084:3088		UAA/GAN related
homologous
IL_8C3A_127
NA
IL_6M62_0971/1/3063:3064,
1/1/3077:3080		Multiple bulged bases
homologous
IL_5TBW_119
NA
IL_6M62_0981/1/3103:3107,
1/1/3127:3131		UAA/GAN
homologous
IL_8C3A_129
NA
IL_6M62_1331/1/3164:3166,
1/1/3284:3286		Isolated non-canonical cWW pair
homologous
IL_8CRE_130
IL_87907.2
IL_6M62_1341/1/3168:3170,
1/1/3280:3282		Isolated non-canonical cWW pair
homologous
IL_8P9A_350
IL_28037.2
IL_6M62_1001/1/3177:3179,
1/1/3210:3211		Single bulged A
geometric
IL_5TBW_123
NA
IL_6M62_1011/1/3179:3188,
1/1/3204:3210		No text annotation
homologous
IL_5TBW_124
NA
IL_6M62_1021/1/3193:3194,
1/1/3197:3199		Single bulged U
geometric
IL_5TBW_125
NA
IL_6M62_1031/1/3225:3229,
1/1/3258:3260		No text annotation
homologous
IL_5TBW_126
NA
IL_6M62_1041/1/3233:3235,
1/1/3252:3254		Isolated non-canonical cWW pair
geometric
IL_3HHN_004
IL_87907.2
IL_6M62_1051/1/3235:3238,
1/1/3249:3252		Tandem non-canonical cWW pairs
homologous
IL_5TBW_128
NA
IL_6M62_1061/1/3300:3303,
1/1/3311:3314		Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA
IL_6M62_1071/1/3318:3320,
1/1/3387:3388		Single bulged U
homologous
IL_8C3A_136
NA
IL_6M62_1081/1/3324:3325,
1/1/3381:3383		Single bulged U
homologous
IL_5TBW_131
NA
IL_6M62_1091/1/3328:3330,
1/1/3373:3378		No text annotation
homologous
IL_8C3A_138
NA
IL_6M62_1101/1/3332:3337,
1/1/3367:3371		No text annotation
homologous
IL_5TBW_133
NA
IL_6M62_1111/1/3340:3342,
1/1/3363:3364		Major groove intercalation
geometric
IL_1ET4_002
IL_89505.4
IL_6M62_1121/1/3342:3345,
1/1/3360:3363		Double sheared; A in syn
homologous
IL_8C3A_141
NA
IL_6M62_1131/1/3347:3350,
1/1/3353:3358		Tandem non-canonical cWW pairs
geometric
IL_6JDV_002
IL_85033.2
IL_6M62_1141/2/44:64,
1/2/96:100		No text annotation
geometric
IL_5TBW_144
NA
IL_6M62_1151/2/64:66,
1/2/93:96		Isolated non-canonical cWW pair
geometric
IL_5TBW_145
NA
IL_6M62_1161/2/68:69,
1/2/89:91		Single bulged U
homologous
IL_5TBW_146
NA
IL_6M62_1171/3/15:16,
1/3/63:65		Single bulged A
homologous
IL_5TBW_372
NA
IL_6M62_1301/3/20:30,
1/3/47:59		No text annotation
IL_6M62_1181/3/71:80,
1/3/100:107		No text annotation
IL_6M62_1191/3/80:87,
1/3/94:100		No text annotation
IL_6M62_1351/6/26:27,
1/6/51:54		Multiple bulged bases
geometric
IL_8P9A_381
IL_82107.4
IL_6M62_1211/6/30:34,
1/6/45:48		No text annotation

Problematic loops

#loop idProblemSequence
IL_6M62_017No text annotation
IL_6M62_036No text annotation
IL_6M62_045No text annotation
IL_6M62_053No text annotation
IL_6M62_055No text annotation
IL_6M62_056Isolated non-canonical cWW with bulges
IL_6M62_079No text annotation
IL_6M62_129No text annotation
IL_6M62_099No text annotation
IL_6M62_120Isolated non-canonical cWW with bulges

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6M62_0011/1/113:123,
1/1/149:158,
1/1/263:267		No text annotation
homologous
J3_8P9A_042
J3_19664.1
J3_6M62_0181/1/113:124,
1/1/144:158,
1/1/263:267		No text annotation
J3_6M62_0191/1/340:356,
1/1/363:368,
1/2/21:24		No text annotation
homologous
J3_8P9A_045
J3_30040.2
J3_6M62_0021/1/369:376,
1/1/403:404,
1/2/19:20		No text annotation
homologous
J3_5TBW_002
NA
J3_6M62_0201/1/369:379,
1/1/390:404,
1/2/19:20		No text annotation
homologous
J3_8P9A_047
J3_92134.2
J3_6M62_0031/1/502:503,
1/1/588:597,
1/1/606:611		No text annotation
homologous
J3_5TBW_003
NA
J3_6M62_0041/1/814:820,
1/1/905:907,
1/1/923:926		No text annotation
homologous
J3_5TBW_004
NA
J3_6M62_0051/1/828:831,
1/1/863:867,
1/1/892:897		No text annotation
homologous
J3_5TBW_005
NA
J3_6M62_0061/1/986:987,
1/1/1062:1066,
1/1/1092:1098		No text annotation
homologous
J3_5TBW_006
NA
J3_6M62_0071/1/1230:1232,
1/1/1256:1262,
1/1/1277:1279		No text annotation
homologous
J3_5TBW_007
NA
J3_6M62_0081/1/1479:1485,
1/1/1857:1859,
1/1/1871:1874		No text annotation
homologous
J3_8C3A_006
NA
J3_6M62_0091/1/1488:1491,
1/1/1837:1843,
1/1/1852:1854		No text annotation
homologous
J3_5TBW_009
NA
J3_6M62_0101/1/1526:1531,
1/1/1591:1595,
1/1/1612:1613		No text annotation
homologous
J3_5TBW_010
NA
J3_6M62_0211/1/1537:1542,
1/1/1551:1560,
1/1/1579:1584		No text annotation
J3_6M62_0111/1/1631:1632,
1/1/1641:1645,
1/1/1810:1811		No text annotation
homologous
J3_8C3A_054
NA
J3_6M62_0221/1/1654:1658,
1/1/1791:1792,
1/1/1796:1801		No text annotation
homologous
J3_8P9A_058
J3_12393.2
J3_6M62_0271/1/2431:2439,
1/1/2508:2517,
1/1/2590:2598		No text annotation
J3_6M62_0241/1/2528:2534,
1/1/2546:2563,
1/1/2578:2582		No text annotation
J3_6M62_0131/1/2530:2534,
1/1/2546:2563,
1/1/2578:2581		No text annotation
J3_6M62_0141/1/2664:2668,
1/1/2686:2693,
1/1/2700:2706		No text annotation
J3_6M62_0151/1/2886:2889,
1/1/2914:2916,
1/1/2930:2936		No text annotation
homologous
J3_8C3A_011
NA
J3_6M62_0281/1/3170:3176,
1/1/3212:3220,
1/1/3265:3280		No text annotation
J3_6M62_0161/1/3298:3300,
1/1/3314:3318,
1/1/3388:3390		No text annotation
J3_6M62_0261/2/44:45,
1/2/58:64,
1/2/96:100		No text annotation
homologous
J3_8P9A_067
J3_35667.2
J3_6M62_0291/3/9:14,
1/3/66:67,
1/3/111:112		No text annotation
homologous
J3_8P9A_066
J3_12003.2
J4_6M62_0011/1/112:113,
1/1/267:272,
1/1/293:299,
1/1/316:319		No text annotation
homologous
J4_8P9A_012
J4_45801.6
J4_6M62_0021/1/185:189,
1/1/205:208,
1/1/212:214,
1/1/226:231		No text annotation
homologous
J4_8P9A_013
J4_12410.1
J4_6M62_0031/1/1451:1457,
1/1/1475:1476,
1/1/1877:1880,
1/1/2352:2353		No text annotation
homologous
J4_8P9A_014
J4_87855.1
J4_6M62_0041/1/1492:1496,
1/1/1520:1525,
1/1/1614:1615,
1/1/1829:1836		No text annotation
homologous
J4_8P9A_015
J4_69051.6
J4_6M62_0051/1/1674:1675,
1/1/1693:1694,
1/1/1752:1753,
1/1/1772:1773		No text annotation
homologous
J4_8P9A_016
J4_24280.2
J4_6M62_0061/1/3010:3012,
1/1/3042:3043,
1/1/3098:3100,
1/1/3134:3136		No text annotation
homologous
J4_8P9A_020
J4_65356.1
J5_6M62_0011/1/20:22,
1/2/35:42,
1/2/102:107,
1/2/115:116,
1/2/137:139		No text annotation
homologous
J5_8C3A_001
NA
J5_6M62_0021/1/658:663,
1/1/799:802,
1/1/941:944,
1/1/1375:1376,
1/1/1431:1437		No text annotation
homologous
J5_8C3A_002
NA
J5_6M62_0031/1/675:678,
1/1/702:706,
1/1/713:721,
1/1/749:751,
1/1/782:787		No text annotation
homologous
J5_8P9A_012
J5_23272.1
J5_6M62_0041/1/1906:1914,
1/1/1938:1939,
1/1/2109:2110,
1/1/2114:2122,
1/1/2331:2333		No text annotation
homologous
J5_8P9A_013
J5_62523.6
J5_6M62_0051/1/2398:2412,
1/1/2810:2832,
1/1/2856:2876,
1/1/2950:2957,
1/1/2975:2981		No text annotation
J5_6M62_0061/1/2621:2630,
1/1/2648:2659,
1/1/2711:2716,
1/1/2740:2741,
1/1/2753:2757		No text annotation
J6_6M62_0011/1/22:27,
1/1/58:68,
1/1/75:79,
1/1/106:110,
1/1/321:331,
1/2/32:35		No text annotation
J7_6M62_0011/1/949:954,
1/1/967:968,
1/1/1114:1117,
1/1/1141:1146,
1/1/1157:1161,
1/1/1338:1339,
1/1/1365:1370		No text annotation

Problematic loops

#loop idProblemSequence
J3_6M62_012No text annotation
J3_6M62_023No text annotation
J3_6M62_025No text annotation
J3_6M62_017No text annotation

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