HL_6MTB_123
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- (OMG)UCUUG(1MA)AAC(A2M)C
- Length
- 12 nucleotides
- Bulged bases
- 6MTB|1|5|C|1325
- QA status
- Modified nucleotides: OMG, 1MA, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTB_123 not in the Motif Atlas
- Geometric match to HL_4TUE_218
- Geometric discrepancy: 0.3895
- The information below is about HL_4TUE_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.2
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6MTB|1|5|OMG|1316
6MTB|1|5|U|1317
6MTB|1|5|C|1318
6MTB|1|5|U|1319
6MTB|1|5|U|1320
6MTB|1|5|G|1321
6MTB|1|5|1MA|1322
6MTB|1|5|A|1323
6MTB|1|5|A|1324
6MTB|1|5|C|1325
6MTB|1|5|A2M|1326
6MTB|1|5|C|1327
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain a
- 60S ribosomal protein L27a
- Chain e
- 60S ribosomal protein L32
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