HL_6MTB_127
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 6MTB|1|9|U|890
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTB_127 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.594
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6MTB|1|9|U|885
6MTB|1|9|A|886
6MTB|1|9|U|887
6MTB|1|9|U|888
6MTB|1|9|U|889
6MTB|1|9|U|890
6MTB|1|9|G|891
6MTB|1|9|U|892
6MTB|1|9|U|893
6MTB|1|9|G|894
6MTB|1|9|G|895
6MTB|1|9|U|896
6MTB|1|9|U|897
6MTB|1|9|U|898
6MTB|1|9|U|899
6MTB|1|9|C|900
6MTB|1|9|G|901
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain LL
- 40S ribosomal protein S11
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