HL_6MTC_041
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 6MTC|1|5|U|2530, 6MTC|1|5|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTC_041 not in the Motif Atlas
- Geometric match to HL_4V9F_037
- Geometric discrepancy: 0.1479
- The information below is about HL_4V9F_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81545.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6MTC|1|5|G|2523
6MTC|1|5|U|2524
6MTC|1|5|U|2525
6MTC|1|5|C|2526
6MTC|1|5|A|2527
6MTC|1|5|G|2528
6MTC|1|5|A|2529
6MTC|1|5|U|2530
6MTC|1|5|C|2531
6MTC|1|5|C|2532
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain R
- 60S ribosomal protein L19
- Chain X
- 60S ribosomal protein L23a
- Chain g
- 60S ribosomal protein L34
Coloring options: