HL_6MTD_083
3D structure
- PDB id
- 6MTD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUAAUUC
- Length
- 7 nucleotides
- Bulged bases
- 6MTD|1|9|U|161
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTD_083 not in the Motif Atlas
- Homologous match to HL_4V88_188
- Geometric discrepancy: 0.1703
- The information below is about HL_4V88_188
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6MTD|1|9|G|156
6MTD|1|9|U|157
6MTD|1|9|A|158
6MTD|1|9|A|159
6MTD|1|9|U|160
6MTD|1|9|U|161
6MTD|1|9|C|162
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain GG
- eS6
- Chain YY
- eS24
Coloring options: