HL_6NDK_005

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

6NDK|1|QA|U|202, 6NDK|1|QA|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NDK_005 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.3227

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

6NDK|1|QA|G|200
6NDK|1|QA|C|201
6NDK|1|QA|U|202
6NDK|1|QA|U|203
6NDK|1|QA|U|204
6NDK|1|QA|G|216
6NDK|1|QA|C|217

Current chains

Chain QA

16S rRNA

Nearby chains