HL_6NDK_207

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NDK_207 not in the Motif Atlas

Homologous match to HL_7RQB_062

Geometric discrepancy: 0.128

The information below is about HL_7RQB_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|YA|C|2551
6NDK|1|YA|OMU|2552
6NDK|1|YA|G|2553
6NDK|1|YA|U|2554
6NDK|1|YA|U|2555
6NDK|1|YA|C|2556
6NDK|1|YA|G|2557

Current chains

Chain YA

23S rRNA

Nearby chains

Chain ZB

tRNA acceptor end mimic