HL_6NTA_114

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

6NTA|1|XA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NTA_114 not in the Motif Atlas

Geometric match to HL_5H9F_001

Geometric discrepancy: 0.3332

The information below is about HL_5H9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

6NTA|1|XA|C|341
6NTA|1|XA|C|342
6NTA|1|XA|U|343
6NTA|1|XA|A|344
6NTA|1|XA|C|345
6NTA|1|XA|G|346
6NTA|1|XA|G|347
6NTA|1|XA|G|348

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19