3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGAACAGC
Length
8 nucleotides
Bulged bases
6NU2|1|A|A|2110, 6NU2|1|A|G|2113
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU2_012 not in the Motif Atlas
Homologous match to HL_7A0S_026
Geometric discrepancy: 0.2306
The information below is about HL_7A0S_026
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_34789.4
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
399

Unit IDs

6NU2|1|A|G|2107
6NU2|1|A|G|2108
6NU2|1|A|A|2109
6NU2|1|A|A|2110
6NU2|1|A|C|2111
6NU2|1|A|A|2112
6NU2|1|A|G|2113
6NU2|1|A|C|2114

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
39S ribosomal protein L10, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial
Chain z
Ribosome-recycling factor, mitochondrial

Coloring options:


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