3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
GUGAAGAGGC
Length
10 nucleotides
Bulged bases
6NU3|1|A|A|2693, 6NU3|1|A|A|2694, 6NU3|1|A|G|2695
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU3_027 not in the Motif Atlas
Homologous match to HL_4WF9_047
Geometric discrepancy: 0.2193
The information below is about HL_4WF9_047
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_78372.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
10

Unit IDs

6NU3|1|A|G|2690
6NU3|1|A|U|2691
6NU3|1|A|G|2692
6NU3|1|A|A|2693
6NU3|1|A|A|2694
6NU3|1|A|G|2695
6NU3|1|A|A|2696
6NU3|1|A|G|2697
6NU3|1|A|G|2698
6NU3|1|A|C|2699

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain E
39S ribosomal protein L3, mitochondrial
Chain S
39S ribosomal protein L21, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:


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