3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
AAUGAUAUCAUCUCAACU
Length
18 nucleotides
Bulged bases
6NU3|1|A|U|3183, 6NU3|1|A|C|3189
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU3_039 not in the Motif Atlas
Geometric match to HL_7A0S_074
Geometric discrepancy: 0.3195
The information below is about HL_7A0S_074
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_28904.1
Basepair signature
cWW-F-F-tWH-cWH-tSH-tHW-F-F-F-F-F
Number of instances in this motif group
1

Unit IDs

6NU3|1|A|A|3176
6NU3|1|A|A|3177
6NU3|1|A|U|3178
6NU3|1|A|G|3179
6NU3|1|A|A|3180
6NU3|1|A|U|3181
6NU3|1|A|A|3182
6NU3|1|A|U|3183
6NU3|1|A|C|3184
6NU3|1|A|A|3185
6NU3|1|A|U|3186
6NU3|1|A|C|3187
6NU3|1|A|U|3188
6NU3|1|A|C|3189
6NU3|1|A|A|3190
6NU3|1|A|A|3191
6NU3|1|A|C|3192
6NU3|1|A|U|3193

Current chains

Chain A
16S rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain K
39S ribosomal protein L13, mitochondrial
Chain k
39S ribosomal protein L53, mitochondrial
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:


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