3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NUO_020 not in the Motif Atlas
Homologous match to HL_4LFB_020
Geometric discrepancy: 0.0946
The information below is about HL_4LFB_020
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

6NUO|1|QA|C|897
6NUO|1|QA|G|898
6NUO|1|QA|C|899
6NUO|1|QA|A|900
6NUO|1|QA|A|901
6NUO|1|QA|G|902

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QQ
30S ribosomal protein S17
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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