HL_6NUO_025

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

6NUO|1|QA|C|1137, 6NUO|1|QA|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_025 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3954

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6NUO|1|QA|G|1134
6NUO|1|QA|U|1135
6NUO|1|QA|U|1136
6NUO|1|QA|C|1137
6NUO|1|QA|G|1138
6NUO|1|QA|G|1139
6NUO|1|QA|C|1140

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9