HL_6NUO_048

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

6NUO|1|RA|G|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_048 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.0752

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

6NUO|1|RA|G|437
6NUO|1|RA|G|438
6NUO|1|RA|A|439
6NUO|1|RA|C|440
6NUO|1|RA|C|441
6NUO|1|RA|A|442
6NUO|1|RA|C|443
6NUO|1|RA|C|444

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15