HL_6NUO_053

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

6NUO|1|RA|U|638, 6NUO|1|RA|G|639

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_053 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.3552

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

6NUO|1|RA|C|635
6NUO|1|RA|G|636
6NUO|1|RA|U|637
6NUO|1|RA|U|638
6NUO|1|RA|G|639
6NUO|1|RA|A|640
6NUO|1|RA|G|641

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4