HL_6NUO_075

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6NUO|1|RA|A|1660, 6NUO|1|RA|A|1662, 6NUO|1|RA|A|1664

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_075 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.0776

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6NUO|1|RA|C|1658
6NUO|1|RA|G|1659
6NUO|1|RA|A|1660
6NUO|1|RA|C|1661
6NUO|1|RA|A|1662
6NUO|1|RA|C|1663
6NUO|1|RA|A|1664
6NUO|1|RA|G|1665

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R7

50S ribosomal protein L34

Chain RW

50S ribosomal protein L22