3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NUO_082 not in the Motif Atlas
Homologous match to HL_7RQB_047
Geometric discrepancy: 0.1566
The information below is about HL_7RQB_047
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

6NUO|1|RA|U|1895
6NUO|1|RA|G|1896
6NUO|1|RA|C|1897
6NUO|1|RA|A|1898
6NUO|1|RA|A|1899
6NUO|1|RA|G|1900

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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